|
yeaH
|
| |
| Information
for yeaH, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1864932-1866866
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1866979-1868262
|
+
|
CDS
|
yeaH
|
|
orf; hypothetical protein
|
|
1868409-1869884
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for yeaH:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.896
|
1866897-1866920
|
ccggg CCTACAACGACAGCGAACCGTGGG cctga
|
-
|
0
|
REP134 (5)
|
|
|
|
|
0.750
|
1866949-1866965
|
tagca TACAGTTGGCAAATGTA gtacg
|
-
|
0
|
REP134 (6)
|
|
-
|
|
|
0.430
|
1866876-1866896
|
cctgg CCCGGTACACATGTTACCGGG cctac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|