|
yecK
|
| |
| Information
for yecK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1952602-1955049
|
-
|
CDS
|
|
|
biotin sulfoxide reductase 2
|
|
1955056-1956156
|
-
|
CDS
|
yecK
|
|
putative cytochrome C-type protein
|
|
1956544-1956984
|
-
|
CDS
|
|
|
copper homeostasis protein
|
|
| |
Reported regulatory
sites for yecK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.595
|
1956341-1956359 R
|
ttatg GGATTTAAATTACTAAAAC tgata
|
-
|
0
|
-
|
|
|
|
|
1.411
|
1956323-1956342 R
|
ctaaa ACTGATAAATATATATTCTA aatag
|
-
|
0
|
-
|
|
|
|
|
1.411
|
1956193-1956212 R
|
attcg TTGTATATTTAATTATACAA tgatt
|
-
|
0
|
-
|
|
|
|
|
0.447
|
1956463-1956486 R
|
ctgca ATTTCAACAGGGGCCTTTTTTTAT ccctg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.18
|
|
p=0.05
|
2.36
|
|
p=0.1
|
2.00
|
|
p=0.2
|
1.60
|
|
|