|
ygeA
|
| |
| Information
for ygeA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2977043-2977978
|
+
|
CDS
|
|
|
positive regulator for lys
|
|
2977965-2978657
|
-
|
CDS
|
ygeA
|
|
putative resistance proteins
|
|
2978786-2980204
|
-
|
CDS
|
|
|
low-affinity L-arabinose transport system proton symport protein
|
|
| |
Reported regulatory
sites for ygeA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.858
|
2978758-2978774 R
|
gggcc GGATGTGCTGTACATCC ggccc
|
-
|
0
|
REPt208 (17)
|
|
-
|
|
|
0.012
|
2978675-2978698 R
|
gttcc TTATTCAGCCTTGTTGCGGTAACA cacat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|