yghK
 
Information for yghK, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3115101-3117128
-
CDS
putative endoglucanase
3117613-3119295
-
CDS
yghK
putative permease
3119650-3121821
-
CDS
malate synthase G
 
Reported regulatory sites for yghK:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.333
3119623-3119641 R
cgtca AAAAAGCCCCGGCAAGTTT tattg
-
0
-
0.918
3119359-3119375 R
gccta TATTTTACAGTTCAGTC ctctt
-
0
-
 
Critical MAP values:
p=0.01
6.09
p=0.05
4.94
p=0.1
4.37
p=0.2
3.74

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