ygiM
 
Information for ygiM, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3197305-3198606
-
CDS
orf; hypothetical protein
3198848-3199468
+
CDS
ygiM
orf; hypothetical protein
3199532-3200770
+
CDS
tRNA nucleotidyl transferase
 
Reported regulatory sites for ygiM:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.556
3198714-3198733
cgggc AATTTGACGGGCGTAAAAGT ttgaa
-
0
-
2.554
3198790-3198811
tttgc GTAGCGACACTGATGCCACTAC tatcg
-
0
-
2.232
3198684-3198699
gatag TATTTTGCGCCAAATT gccat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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