|
yhbM
|
| |
| Information
for yhbM, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3303612-3305552
|
-
|
CDS
|
|
|
inducible ATP-independent RNA helicase
|
|
3305681-3306565
|
-
|
CDS
|
yhbM
|
|
putative control proteins
|
|
3306674-3308878
|
-
|
CDS
|
|
|
polynucleotide phosphorylase; cytidylate kinase activity
|
|
| |
Reported regulatory
sites for yhbM:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.813
|
3306567-3306584 R
|
aaccg TGGTCTTCGGGAGTGGGA aatga
|
-
|
0
|
-
|
|
|
|
|
2.531
|
3306616-3306631 R
|
aaccg GGCAGGACGCCTTGTT agcaa
|
-
|
0
|
-
|
|
|
|
|
2.531
|
3306590-3306605 R
|
ccggg AACAGGACGTTCATTC aaccg
|
-
|
0
|
-
|
|
|
|
|
1.785
|
3306654-3306675 R
|
cgagt AAGGTTGCCATTTGCCCTCCGC tgcgg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|