|
yhfL
|
| |
| Information
for yhfL, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3495465-3496838
|
+
|
CDS
|
|
|
uroporphyrinogen III methylase; sirohaeme biosynthesis
|
|
3497085-3497252
|
+
|
CDS
|
yhfL
|
|
orf; hypothetical protein
|
|
3497496-3498884
|
+
|
CDS
|
|
|
putative amino acid/amine transport protein
|
|
| |
Reported regulatory
sites for yhfL:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.499
|
3497040-3497061
|
ttcat ATAATCAATGAATATTAATTAA tatat
|
-
|
0
|
-
|
|
|
|
|
0.561
|
3496883-3496906
|
ctttt TATATATTCAGCAAATAAAACATA gcccc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|