yhfM
 
Information for yhfM, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3497085-3497252
+
CDS
orf; hypothetical protein
3497496-3498884
+
CDS
yhfM
putative amino acid/amine transport protein
3498884-3499927
+
CDS
putative transport protein
 
Reported regulatory sites for yhfM:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.316
3497294-3497317
cccga CGCCCTCTGGATTTTCCGAGGGCG tattt
-
0
-
0.646
3497443-3497466
acatt ACATAACATCATATGTTGTTATAT tcatc
-
0
-
0.200
3497253-3497274
agtaa GTCTCTGACAGAAATCGGCTAA caccg
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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