|
yhjK
|
| |
| Information
for yhjK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3679791-3681077
|
-
|
CDS
|
|
|
uptake of C4-dicarboxylic acids
|
|
3681260-3683215
|
-
|
CDS
|
yhjK
|
|
orf; hypothetical protein
|
|
3683330-3686830
|
-
|
CDS
|
|
|
putative oxidoreductase subunit
|
|
| |
Reported regulatory
sites for yhjK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.748
|
3683279-3683296 R
|
gctgc GATCGGGTATACTCGGGC ggcaa
|
-
|
0
|
-
|
|
|
|
|
3.468
|
3683305-3683327 R
|
taagt TTTCAGATAGCGCCTCTCTTAAT gccgc
|
-
|
0
|
-
|
|
|
|
|
3.468
|
3683227-3683249 R
|
gacaa TTTGCGCGTAAGTCGCTCGTTAA caatc
|
-
|
0
|
-
|
|
|
|
|
3.308
|
3683262-3683278 R
|
cgggc GGCAATCTGGGATTTCC ggggg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|