yiaH
 
Information for yiaH, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3722036-3722947
-
CDS
glycine tRNA synthetase; alpha subunit
3723516-3724511
+
CDS
yiaH
orf; hypothetical protein
3724553-3724993
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for yiaH:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.779
3723042-3723062
agggc TTAACGCATGGAAAGATGCAA aaaat
-
0
-
1.779
3723415-3723435
tttcc TTAAGCCTCTATAAGCTGTAG tgata
-
0
-
1.765
3723137-3723153
gcttc CCTGGAACTGTTCGAAG gcggt
-
0
-
1.765
3723443-3723459
ataaa ACTCAGATTATTCCAGT gcgcc
-
0
-
1.745
3723105-3723125
tcttt ACGGAAGGTATAACCGCGCAT ttcat
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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