|
yibF
|
| |
| Information
for yibF, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3757485-3758876
|
-
|
CDS
|
|
|
selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase
|
|
3758974-3759582
|
-
|
CDS
|
yibF
|
|
putative S-transferase
|
|
3759810-3763943
|
+
|
CDS
|
|
|
rhsA protein in rhs element
|
|
| |
Reported regulatory
sites for yibF:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.084
|
3759693-3759716 R
|
gagtg AAATAATTAGGAAAATATTTATAT cacca
|
-
|
0
|
-
|
|
|
|
|
2.007
|
3759667-3759687 R
|
cacca TGATAAATATGTGATTTATTT ggaag
|
-
|
0
|
-
|
|
|
|
|
0.518
|
3759722-3759737 R
|
cctga AGTGAGATATCCATCA gagtg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|