|
yiiG
|
| |
| Information
for yiiG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4083596-4084429
|
+
|
CDS
|
|
|
affects formate dehydrogenase-N
|
|
4084582-4085637
|
+
|
CDS
|
yiiG
|
|
orf; hypothetical protein
|
|
4085688-4087436
|
-
|
CDS
|
|
|
putative frv operon regulatory protein
|
|
| |
Reported regulatory
sites for yiiG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.744
|
4084489-4084506
|
tttta TTATTTTATTTATAAACA aaatg
|
-
|
0
|
-
|
|
|
|
|
1.945
|
4084430-4084453
|
attaa TTAAAATAAGTCCTGCGAAATATA ttaaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|