|
yjcX
|
| |
| Information
for yjcX, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4307027-4308559
|
-
|
CDS
|
|
|
putative ATP-binding component of a transport system
|
|
4308686-4309621
|
-
|
CDS
|
yjcX
|
|
putative LACI-type transcriptional regulator
|
|
4309680-4310603
|
-
|
CDS
|
|
|
transcriptional repressor of rpiB expression
|
|
| |
Reported regulatory
sites for yjcX:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.155
|
4309650-4309671 R
|
aaagg TAATTCCGCCATCGCGGAGTTA cctgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.18
|
|
p=0.05
|
2.36
|
|
p=0.1
|
2.00
|
|
p=0.2
|
1.60
|
|
|