|
yjgB
|
| |
| Information
for yjgB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4492191-4492754
|
+
|
CDS
|
|
|
gluconate kinase; thermosensitive glucokinase
|
|
4492758-4493819
|
-
|
CDS
|
yjgB
|
|
putative oxidoreductase
|
|
4493973-4494057
|
+
|
tRNA
|
|
|
Leucine tRNA5 (amber [UAG] suppressor)
|
|
| |
Reported regulatory
sites for yjgB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
8.050
|
4493872-4493888 R
|
ctaag TGCTGAAATTTTCAGCA ttgca
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.535
|
4493949-4493965 R
|
tgaag AGGTATGCGGAAAACGT tgtgg
|
-
|
0
|
-
|
|
|
|
|
2.690
|
4493926-4493947 R
|
acgtt GTGGATTATACCTGTCGCACGC cacca
|
-
|
0
|
-
|
|
|
|
|
2.690
|
4493838-4493859 R
|
cagcg ATGTGTAACCTTTGTCACACTC caggc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|