|
yjgR
|
| |
| Information
for yjgR, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4484883-4485968
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
4486129-4487631
|
-
|
CDS
|
yjgR
|
|
orf; hypothetical protein
|
|
4487709-4488707
|
-
|
CDS
|
|
|
L-idonate transcriptional regulator
|
|
| |
Reported regulatory
sites for yjgR:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.412
|
4487640-4487659 R
|
ctata CTCCAGGCAGGAAACTGGAG gatat
|
-
|
0
|
-
|
|
-
|
|
|
0.273
|
4487651-4487667 R
|
gacgt TGCCTATACTCCAGGCA ggaaa
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.55
|
|
p=0.05
|
3.60
|
|
p=0.1
|
3.00
|
|
p=0.2
|
2.32
|
|
|