|
yjjI
|
| |
| Information
for yjjI, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4612249-4613112
|
-
|
CDS
|
|
|
putative activating enzyme
|
|
4613084-4614634
|
-
|
CDS
|
yjjI
|
|
orf; hypothetical protein
|
|
4614892-4615671
|
+
|
CDS
|
|
|
2-deoxyribose-5-phosphate aldolase
|
|
| |
Reported regulatory
sites for yjjI:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.432
|
4614832-4614847 R
|
gagtt TGTTAGTATTCTAACA tctac
|
deoR
|
16
|
-
|
|
|
|
|
3.892
|
4614797-4614816 R
|
aacac ACTTCGATACACATCACAAT taagg
|
crp
|
20
|
-
|
|
|
|
|
3.892
|
4614744-4614763 R
|
actgt AATGCGATCTGGTTCAAATA attca
|
crp
|
20
|
-
|
|
|
|
|
1.278
|
4614764-4614781 R
|
tactt ACAAGTTTGCATCACTGT aatgc
|
cytR crp
|
14 1
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|