|
ylbC
|
| |
| Information
for ylbC, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
543281-544516
|
-
|
CDS
|
|
|
putative hydantoin utilization protein
|
|
544538-545587
|
-
|
CDS
|
ylbC
|
|
putative malate dehydrogenase (EC 1.1.1.37)
|
|
545904-547571
|
+
|
CDS
|
|
|
involved in protein transport; multicopy suppressor of dominant negative ftsH mutants
|
|
| |
Reported regulatory
sites for ylbC:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.958
|
545672-545695 R
|
tatca AATAAATTCTAACTATATTTTTTT gcctg
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.147
|
545871-545889 R
|
ttaaa AATTGCACCCATGGCAATT gcacg
|
-
|
0
|
-
|
|
|
|
|
3.522
|
545596-545616 R
|
tcatg CTTCACACCGTCGTTAAAAAG gaaga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|