|
yleB
|
| |
| Information
for yleB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
692754-694178
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
694324-695499
|
+
|
CDS
|
yleB
|
|
orf; hypothetical protein
|
|
695581-695916
|
+
|
CDS
|
|
|
putative RNA
|
|
| |
Reported regulatory
sites for yleB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.053
|
694181-694198
|
catcg ACTTGCTCTTGCGAAATA gtagc
|
-
|
0
|
-
|
|
|
|
|
1.708
|
694219-694235
|
gggcg CATAGTGTAATGCTTTG ctgcc
|
-
|
0
|
-
|
|
|
|
|
1.368
|
694274-694292
|
cttag GGGTAAAAATCCTGTAAAC ttaaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|