|
yojI
|
| |
| Information
for yojI, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2303128-2304774
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2304992-2306635
|
-
|
CDS
|
yojI
|
|
putative ATP-binding component of a transport system
|
|
2306711-2307361
|
-
|
CDS
|
|
|
DNA repair system specific for alkylated DNA
|
|
| |
Reported regulatory
sites for yojI:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.275
|
2306690-2306713 R
|
aagaa TAAAAATAAGAATTATTATTGCTG tgcgc
|
-
|
0
|
-
|
|
|
|
|
1.279
|
2306655-2306674 R
|
gatgt TTAAACTGCGGGCTGTAATT cattg
|
-
|
0
|
-
|
|
|
|
|
0.596
|
2306666-2306688 R
|
gctgt GCGCGCGAAGATGTTTAAACTGC gggct
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.76
|
|
p=0.05
|
3.70
|
|
p=0.1
|
3.23
|
|
p=0.2
|
2.71
|
|
|