ytfE
 
Information for ytfE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4427442-4428854
+
CDS
transport of D-alanine; D-serine; and glycine
4428899-4429561
-
CDS
ytfE
orf; hypothetical protein
4429669-4430643
-
CDS
putative transmembrane subunit
 
Reported regulatory sites for ytfE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.278
4429588-4429610 R
cctta AAGATGCATTTAAAATACATCTT atctt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.509
4429568-4429587 R
atctt ATCTTATTAAGAATGAGGTA tcagc
-
0
-
0.539
4429637-4429660 R
gctgg CAGTGAGTTAAATAAGCCTCTGCT acgta
-
0
-
0.539
4429613-4429636 R
ctgct ACGTAAGGGTTATAGCTTTTGCCT taaag
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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