zipA
 
Information for zipA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2526181-2528196
-
CDS
DNA ligase
2528267-2529253
-
CDS
zipA
cell division protein involved in FtsZ ring
2529483-2530244
+
CDS
required for sulfate transport
 
Reported regulatory sites for zipA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.640
2529277-2529293 R
aaatg TTTGCCGTGGTGGCAAG gtgtt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.021
2529361-2529384 R
acagc AAAAAGCACGATTTCATCTATCTT tgtgc
-
0
-
2.436
2529310-2529333 R
cactt GCACTTGAGGTAATCGGCAAATAC tctta
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

Click here to go back