b0947 Gene Page
Genbank name: b0947
EcoGene name: ycbX
Divergent gene: ycbY
Species with an ortholog:
EC PA ST VC YP
EcoGene link: EG13716
Species that contributed to the solution: EC ST YP
Total number of sites in the solution: 4
Number of E. coli sites in the solution: 2
Map value: 18.14
Model logo: b0947.1.model.LGO.gif
Sequence logo: b0947.1.LGO.gif
Sequence Alignment: b0947.1.ALGN
Solution location in genomic coordinates: 1007026-1007042 R
Solution sequence with flanking nucleotides: gagcc TACCGCAGTAGGCGTAA ttgtt
Number of overlapping basepairs with reported site: 0
Site type:
Repeat: RSA2 Overlap: 17
Solution location in genomic coordinates: 1006877-1006893 R
Solution sequence with flanking nucleotides: aattg TTGCGCATTATAGCTAA taagc
Number of overlapping basepairs with reported site: 0
Site type:
Species that contributed to the solution: EC ST YP
Total number of sites in the solution: 3
Number of E. coli sites in the solution: 1
Map value: 12.66
Model logo: b0947.2.model.LGO.gif
Sequence logo: b0947.2.LGO.gif
Sequence Alignment: b0947.2.ALGN
Solution location in genomic coordinates: 1006847-1006865 R
Solution sequence with flanking nucleotides: cgtca TGTCATAAAGTTGAGGGCT tattt
Number of overlapping basepairs with reported site: 0
Site type:
Species that contributed to the solution: EC ST
Total number of sites in the solution: 3
Number of E. coli sites in the solution: 2
Map value: 5.91
Model logo: b0947.3.model.LGO.gif
Sequence logo: b0947.3.LGO.gif
Sequence Alignment: b0947.3.ALGN
Solution location in genomic coordinates: 1007046-1007064 R
Solution sequence with flanking nucleotides: at CGTCACTTTTACTCTAAGA gccta
Number of overlapping basepairs with reported site: 0
Site type:
Repeat: RSA2 Overlap: 3
Solution location in genomic coordinates: 1006932-1006950 R
Solution sequence with flanking nucleotides: gcata ACCCAGGGCCAAACTGACA aataa
Number of overlapping basepairs with reported site: 0
Site type:
Repeat: RSA2 Overlap: 19
Gene Index Page