trmA Gene Page
Genbank name: trmA
EcoGene name: trmA
Divergent gene: btuB
Species with an ortholog:
AA EC HI PA SP ST VC YP
EcoGene link: EG11022
Species that contributed to the solution: EC PA ST VC YP
Total number of sites in the solution: 8
Number of E. coli sites in the solution: 2
Map value: 23.94
Model logo: trmA.1.model.LGO.gif
Sequence logo: trmA.1.LGO.gif
Sequence Alignment: trmA.1.ALGN
Solution location in genomic coordinates: 4161128-4161144 R
Solution sequence with flanking nucleotides: atgcg ACGTTGGCCGGCAGGTC ttcgg
Number of overlapping basepairs with reported site: 0
Site type:
Solution location in genomic coordinates: 4161018-4161034 R
Solution sequence with flanking nucleotides: cctta CCGCTGCGCGTCAGCTC cagat
Number of overlapping basepairs with reported site: 0
Site type:
Species that contributed to the solution: EC ST VC YP
Total number of sites in the solution: 5
Number of E. coli sites in the solution: 1
Map value: 17.89
Model logo: trmA.2.model.LGO.gif
Sequence logo: trmA.2.LGO.gif
Sequence Alignment: trmA.2.ALGN
Solution location in genomic coordinates: 4160998-4161016 R
Solution sequence with flanking nucleotides: gctcc AGATTCGCACTGGATTCCC tatta
Number of overlapping basepairs with reported site: 0
Site type:
Species that contributed to the solution: AA EC HI PA SP ST
Total number of sites in the solution: 7
Number of E. coli sites in the solution: 2
Map value: 11.95
Model logo: trmA.3.model.LGO.gif
Sequence logo: trmA.3.LGO.gif
Sequence Alignment: trmA.3.ALGN
Solution location in genomic coordinates: 4161174-4161190 R
Solution sequence with flanking nucleotides: aagga TGCCGCAGGTTTCATCA atatt
Number of overlapping basepairs with reported site: 0
Site type:
Solution location in genomic coordinates: 4160954-4160970 R
Solution sequence with flanking nucleotides: gtgga TGCTACAGGTTGTAACA agtta
Number of overlapping basepairs with reported site: 0
Site type:
Gene Index Page