xthA Gene Page

Genbank name: xthA
EcoGene name: xthA
Divergent gene: argM
Species with an ortholog: AA   EC   HI   PA   SP   ST   TF   VC   YP   
EcoGene link: EG11073

Species that contributed to the solution: AA EC HI PA ST TF VC
Total number of sites in the solution: 9
Number of E. coli sites in the solution: 2
Map value: 8.45
Model logo: xthA.1.model.LGO.gif
Sequence logo: xthA.1.LGO.gif
Sequence Alignment: xthA.1.ALGN
Solution location in genomic coordinates: 1830247-1830263
Solution sequence with flanking nucleotides: taaaa TATAATTCTGGAATTGT gatca
Number of overlapping basepairs with reported site: 0
Site type:
Solution location in genomic coordinates: 1830275-1830291
Solution sequence with flanking nucleotides: tgacg AAATTTACTGGAAATTA ctgcg
Number of overlapping basepairs with reported site: 0
Site type:

Species that contributed to the solution: EC HI ST YP
Total number of sites in the solution: 5
Number of E. coli sites in the solution: 2
Map value: 6.67
Model logo: xthA.2.model.LGO.gif
Sequence logo: xthA.2.LGO.gif
Sequence Alignment: xthA.2.ALGN
Solution location in genomic coordinates: 1830069-1830092
Solution sequence with flanking nucleotides: gctgt AAATGTAGATTGCAGGGTTCGTGC cagcc
Number of overlapping basepairs with reported site: 0
Site type:
Solution location in genomic coordinates: 1830316-1830339
Solution sequence with flanking nucleotides: cgcgc ACCAAAAGCGGGCATTTTTTGCGC catcg
Number of overlapping basepairs with reported site: 0
Site type:

Species that contributed to the solution: EC HI PA SP ST VC YP
Total number of sites in the solution: 9
Number of E. coli sites in the solution: 2
Map value: 6.37
Model logo: xthA.3.model.LGO.gif
Sequence logo: xthA.3.LGO.gif
Sequence Alignment: xthA.3.ALGN
Solution location in genomic coordinates: 1830130-1830150
Solution sequence with flanking nucleotides: gctaa CTGGAAATCAAGGAGTTATAA ccaaa
Number of overlapping basepairs with reported site: 0
Site type:
Solution location in genomic coordinates: 1830218-1830238
Solution sequence with flanking nucleotides: agaat AAAAAACGCAATGTTATGCAG aagta
Number of overlapping basepairs with reported site: 0
Site type:


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